Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015923582.1_cds_XP_016472166.1_64428
CDS Infomation

[gene=LOC107794207] [db_xref=GeneID:107794207] [protein=peroxisomal fatty acid beta-oxidation multifunctional protein AIM1-like] [protein_id=XP_016472166.1] [location=complement(join(25178..25222,25925..26063,26497..26645,26756..26877,26953..27074,27889..28143,28557..28720,28891..29012,29178..29352,30067..30153,30351..30653,32326..32381,32479..32560,32640..32707,32842..32898,32990..33052,34287..34358,34447..34540))] [gbkey=CDS]
Sequence

ATGGGCGGAGTTAAGGTGACGATGGAGGTGGGAAGCGACGGCGTGGCCGTCATCACCATC
TTTAATCCTCCGGTGAACCCTCTTGCTATTCCCATTATCGCTGGATTGAAAGAGAAGTGG
ACTGAAGCGACGATGAGAAACGATGTTAAAGCTATTGTTTTGACTGGAAATGGAGGGAGA
TTTTCTGGCGGTTTTGATATCAATGTTTTTCAGAAGGTTCATGGGACTGGAGATATTTCT
CAAATGCCTGATGTTTCTGTTGATCTTGTGGTGAACACGATGGAAGATGGTAAGAAGCCT
GCAGTCGCTGCCATAGAAGGACTTGCACTAGGAGGCGGCCTGGAATTGGCATTGGGATGC
CATGCACGAATTGCTGCACCACGAGCACAACTGGGGTTGCCAGAGCTTAGTCTCGGAGTC
ATCCCTGGCTTTGGAGGTACACAACGTCTTCCGAGGCTTATAGGGTTGTCTAAAGCTGTT
GAAATGATGATGACATCTAAACCAATAATGTCGGAAGAAGGGAAGAAGCTTGGTCTTATT
GATGCCATTGCCCCTTCATCAGAGTTGTTGAAAGTATCTAGACAGTGGGCACTCGATATT
GCTGAAAGGCGCAAGCCTTGGATACGTTCCCTTCACAAGACAGACAAAATTGGTTCCCTT
TCTGAAGCGCGTGAAGCGTTGAAGGTGGCTAGGCAACAAGTCAAACAGACAGTTAAGAAT
ATGCCTCAGCAGTTGGCATGCATTGACATAGTTGAAGATGGCATCATCCATGGAGGATAT
CATGGTGTTCTCAAGGAAGCTAAAGTATTTAAGGACCTTGTGTTGTCAGATACATCAAAG
GGTCTTGTTCATGTATTTTTTGCCCAACGGGCAACATCAAAGGTACCCACCGTCACTGAT
ATTGGTCTCAAACCTAGGACGGTCAAGAAAGTTGCTGTAATTGGTGGAGGTTTAATGGGT
TCAGGCATAGCTACAGCTCTTGCTCTTAGCAACACATTTGTTGTACTCAAGGAAATTAAT
TCTGAGTATCTTCAGAAGGGGATGAAAGCTATTGAAGAAAATGTCCGTGGACTGGTAGCT
AGAAAGAAATTGCCACAGGGCAAAGCAGATAAAGCCCTTTCAATGGTTAAAGGTGCATTG
GGTTACTCAGATTTTAAGGATGTGGATGTGGTCATAGAGGCTGTAATTGAAAATATTCCG
CTAAAACAGAAAATATTCAGTGAAATTGAGAAGGTGTGCCCTCCACATTGTATTTTGGCA
AGTAACACATCCACGATCGACCTCAATGTTATTGGAGAAAATACCAGATCCAAGGATAGG
ATTATAGGGGCCCACTTTTTCAGTCCTGCTCACATTATGCCTCTGCTGGAGATAGTACGA
ACAGAGAAGACATCTGCGCAAGCAATTCTTGACCTTATGGCTGTTGGCAAGGCAATTAAG
AAAGTGCCTGTTGTGGTGGGAAATTGTACTGGCTTTGCTGTCAATAGGACCTTCTTTCCC
TACGCCCAGGGCGCACATATTCTGGCCAATCTAGGAGTGGATGTCTACAGGATTGATGCG
CAAATCACCAACTTTGGTCTCCCTATGGGTCCATTCCAGCTTCAGGATTTAACAGGATAT
GGAGTGGCTGTTGCTGTAGGGAAAGAATTTGGGTCAGCTTTTTCTGATCGAACATTTAAG
TCTCCACTGATCGACCTTCTTATAAAAAGTGGTCGAAATGGTAAAAATAATGGAAAAGGA
TACTACATTTACGAAAAGGGAAGGAAGCCAAGACCTGATTTTACGGTGCTTCCAATTGTT
GAGGAATCAAGAAGGCTCACCAACATAATGCCTGGAGGAAAGCCAATATCTGTCACTGAC
CAAGAAATTGTTGAGATGATACTCTTTCCAGTTGTAAATGAGGCATGTCGTGTTTTGGAT
GAGGGGATAGTAGTCCGAGCATCTGACCTTGATGTCGCATCCGTCCTTGGAATGAGTTTC
CCATCTTACCGAGGTGGTATTGTTTTCTGGGCTGACACTGTTGGAGCGGGCCATATATAT
AGAAGTCTCAAGAAGTGGTCAGAATTATATGGTAATTTCTTCAAGCCCTCAAGGTTCTTG
GAAGAGAGAGCGACAAAGGGCATCCCCTTGAGTGCACCTGCTTCTACATCTTCAGCTTCA
AGGTCACGCATTTAA

Peptide Sequence

PEP ID

XP_016472166.1
PEP Infomation

PREDICTED: peroxisomal fatty acid beta-oxidation multifunctional protein AIM1-like [Nicotiana tabacum]
Sequence

MGGVKVTMEVGSDGVAVITIFNPPVNPLAIPIIAGLKEKWTEATMRNDVKAIVLTGNGGR
FSGGFDINVFQKVHGTGDISQMPDVSVDLVVNTMEDGKKPAVAAIEGLALGGGLELALGC
HARIAAPRAQLGLPELSLGVIPGFGGTQRLPRLIGLSKAVEMMMTSKPIMSEEGKKLGLI
DAIAPSSELLKVSRQWALDIAERRKPWIRSLHKTDKIGSLSEAREALKVARQQVKQTVKN
MPQQLACIDIVEDGIIHGGYHGVLKEAKVFKDLVLSDTSKGLVHVFFAQRATSKVPTVTD
IGLKPRTVKKVAVIGGGLMGSGIATALALSNTFVVLKEINSEYLQKGMKAIEENVRGLVA
RKKLPQGKADKALSMVKGALGYSDFKDVDVVIEAVIENIPLKQKIFSEIEKVCPPHCILA
SNTSTIDLNVIGENTRSKDRIIGAHFFSPAHIMPLLEIVRTEKTSAQAILDLMAVGKAIK
KVPVVVGNCTGFAVNRTFFPYAQGAHILANLGVDVYRIDAQITNFGLPMGPFQLQDLTGY
GVAVAVGKEFGSAFSDRTFKSPLIDLLIKSGRNGKNNGKGYYIYEKGRKPRPDFTVLPIV
EESRRLTNIMPGGKPISVTDQEIVEMILFPVVNEACRVLDEGIVVRASDLDVASVLGMSF
PSYRGGIVFWADTVGAGHIYRSLKKWSELYGNFFKPSRFLEERATKGIPLSAPASTSSAS
RSRI

Transcript Sequence

Gene sequence data has not been registered.